Spatial Tissue Book

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See Also:
GeoMx DSP Technology Access Program
CosMx SMI Technology Access Program

Spatial Tissue Book とは?

Spatial Tissue Book は、GeoMx® DSP テクノロジーアクセスプログラム (TAP)　または CosMx™ SMI テクノロジーアクセスプログラム(TAP)を通じて解析された、さまざまな組織タイプや疾患の画像、データ、選択およびセグメンテーション戦略のリポジトリです。

Tissue Book の個々のPDFページには組織の画像が含まれており、疾患や種、実行されたアッセイの種類によって注釈がつけられています。

Tissue Bookはどんなふうに使う?

  • 研究対象の組織および/または疾患領域の代表的な画像を参照してください。
  • 研究設計のニーズを満たすためにROIを選択し、組織をセグメント化する際の研究戦略のアイディアを得ることができます。
  • 様々な疾患を表すそれぞれの組織からの空間トランスクリプトミクスデータを確認しましょう。
GeoMx tissue bookのページ構成を見てみましょう！
Tissue Book page example with charts, images, diagrams and other information

  • The type of tissue and disease profiled.

  • Learn about the application and study design.

  • Get a high-level overview of what kind of sample type was used, species, strategy for area of illumination as well as the assay and morphology markers used. Learn how many targets were detected from the assay for this particular study.

  • See an actual image taken with either the GeoMx Digital Spatial Profiler or the CosMx Spatial Molecular Imager annotated with the different fluorescent markers used to outline tissue morphology and/or cell types.

  • Learn more about the Segmentation Strategy and how individual regions of interest were compartmentalized into different areas of illumination and/or cell type populations.

  • See how many targets were detected above the background for each tissue compartment and/or cell type profiled.

  • View additional plots showing the results of the study.

  • Here you can click on this link to visit our Morphology Marker page to learn about which fluorescently-tagged antibodies or RNAScope Probes have been used on the GeoMx DSP.

Tissue Book Collection

Browse entries here, or just download the complete tissue book.

フィルター選択

Tissue Tissue Biology Species Type Assay Instrument
Lung NSCLC HumanFFPE1000-Plex Human RNA Universal Cell CharacterizationCosMxDownload
Liver Normal HumanFFPE1000-Plex Human RNA Universal Cell CharacterizationCosMxDownload
Liver Hepatocellular Carcinoma HumanFFPE1000-Plex Human RNA Universal Cell CharacterizationCosMxDownload
Brain Normal MouseFresh FrozenCosMx Mouse Neuroscience PanelCosMxDownload
Breast Breast Cancer HumanFFPE1000-Plex Human RNA Universal Cell CharacterizationCosMxDownload
KidneyPediatric Renal AllograftHumanFFPEHuman Whole Transcriptome AtlasGeoMxDownload
Lymph NodeLymphomaHumanFFPEHuman Whole Transcriptome AtlasGeoMxDownload
LungLung CancerHumanFFPEHuman Whole Transcriptome AtlasGeoMxDownload
SkinHidradenitis SuppurativaHumanFFPEHuman Whole Transcriptome AtlasGeoMxDownload
BrainParkinson's DiseaseMouseFFPEMouse Whole Transcriptome AtlasGeoMxDownload
OvaryOvarian CancerHumanFFPEHuman Whole Transcriptome AtlasGeoMxDownload
Brain Schizophrenia HumanFFPEHuman Whole Transcriptome AtlasGeoMxDownload
BreastBreast CancerHumanFFPEHuman Whole Transcriptome AtlasGeoMxDownload
ColonColonic AdenomaHumanFFPEHuman Whole Transcriptome AtlasGeoMxDownload
EsophagusBarrett's MucosaHumanFFPEHuman Whole Transcriptome AtlasGeoMxDownload
KidneyKidney CancerHumanFFPEHuman Whole Transcriptome AtlasGeoMxDownload
LiverHepatocellular CarcinomaHumanFFPEHuman Whole Transcriptome AtlasGeoMxDownload
LungCOVID-19HumanFFPEHuman Whole Transcriptome AtlasGeoMxDownload
LungTuberculosisHumanFFPEHuman Whole Transcriptome AtlasGeoMxDownload
LungNSCLCHumanFFPEHuman Whole Transcriptome AtlasGeoMxDownload
MuscleMyositisHumanFFPEHuman Whole Transcriptome AtlasGeoMxDownload
PlacentaChronic Intervillositis of Unknown EtiologyHumanFFPEHuman Whole Transcriptome AtlasGeoMxDownload
ProstateProstate CancerHumanFFPEHuman Whole Transcriptome AtlasGeoMxDownload
SkinMelanomaHumanFFPEHuman Whole Transcriptome AtlasGeoMxDownload

Related Resources

DSP Technology Access Program
CosMx SMI Technology Access Program
GeoMx Morphology Markers
Spatial Organ Atlas